TSS: Hg 151249.1: Difference between revisions

Revision as of 13:50, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000359445.7 ENST00000561389.1 ENST00000557844.1 uc002bgu.2 uc059mmv.1 uc059mmw.1 BX538332 AK300348 AK056656
Distance:	0
GeneID:	79631
HGNC/MGI_ID:	HGNC:25789
UniProt_ID:	B3KPR5 H0YK75 H0YNW8 Q7Z2Z2

Gene_name:	elongation factor like GTPase 1
Gene_symbol:	EFL1
Gene_synonyms:	FAM42A FLJ13119 HsT19294 RIA1
Gene_source:	HGNC:25789

TATA-Box annotation

Distance to TSS:	61
Nearest PromoterID:	NM_024580
Entrez ID:	79631
Nearest Unigene:	Hs.459114
Nearest Refseq:	NM_024580
Nearest Ensembl:	ENSG00000140598
Gene Name:	elongation factor like GTPase 1
Gene Alias:	EFTUD1
Gene Description:	elongation factor like GTPase 1
Gene Type:	protein-coding
CpG%:	0.13
GC%:	0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|FAM42A=
+|HsT19294=
+|RIA1=
 |all_trans=ENST00000359445.7:0 ENST00000561389.1:0 ENST00000557844.1:0 uc002bgu.2:0 uc059mmv.1:0 uc059mmw.1:0 BX538332:0 AK300348:0 AK056656:0 BC014628:10 ENST00000268206.11:-19 NM_001040610:-19 NM_024580:-19 uc002bgt.2:-19 ENST00000558974.1:196 uc059mmx.1:196
 |chr=chr15
@@ Line 6: / Line 9: @@
 |distance_to_tss=61
 |end=82262744
+|end_of_center_position=82262702
 |entrez_id=79631
 |gc_percent=0.726368
-|gene_alias=EFTUD1|FAM42A|HsT19294|RIA1
+|gene_alias=EFTUD1
 |gene_description=elongation factor like GTPase 1
 |gene_id=79631
@@ Line 24: / Line 28: @@
 |species=human
 |start=82262659
+|start_of_center_position=82262701
 |strand=-
 |transcript_name=ENST00000359445.7 ENST00000561389.1 ENST00000557844.1 uc002bgu.2 uc059mmv.1 uc059mmw.1 BX538332 AK300348 AK056656