rfhg_119912.1
From referenceTSS
Basic information about the TSS
|
| |||||||||||||
Source datasets | PRJNA401781|PRJNA615891|PRJNA4843412|DRA013844|PRJNA548673 |PRJNA597322 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Protocol | CAGE|SLIC_CAGE|TIF-seq2|NETCAGE|RAMPAGE|oligo_capping |ReCappable-seq|STRIPE-seq | |||||||||||||
TSS cluster detected* | 10 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D4243170,EH38E2729880) |
---|---|
Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -6 |
---|---|
Nearest PromoterID: | NM_016390 |
Entrez ID: | 51490 |
Nearest Unigene: | Hs.224137 |
Nearest Refseq: | NM_016390 |
Nearest Ensembl: | ENSG00000198917 |
Gene Name: | SPOUT1 |
Gene Alias: | C9orf114|CENP-32|CENP32|HSPC109 |
Gene Description: | SPOUT domain containing methyltransferase 1 |
Gene Type: | protein-coding |
CpG%: | 0.097561 |
GC%: | 0.619048 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.