rfhg_129980.1

From referenceTSS
Revision as of 23:42, 6 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_129980.1
Species:human
Chr:chr10
Start:104480284
End:104480289
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2386531,EH38E1496831)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC039476:9
GeneID:101927523
HGNC/MGI_ID:HGNC:54097
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:LINC02620
    Gene_symbol:LINC02620
    Gene_synonyms:BCRT1
    Gene_source:HGNC:54097



    TATA-Box annotation


    Distance to TSS:-11
    Nearest PromoterID:NR_120624
    Entrez ID:101927523
    Nearest Unigene:Hs.407539
    Nearest Refseq:NR_120624
    Nearest Ensembl:ENSG00000225768
    Gene Name:LINC02620
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.833333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.