rfhg_192190.1

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Basic information about the TSS


TSS ID:rfhg_192190.1
Species:human
Chr:chr17
Start:35578503
End:35578595
Strand:-
Source datasetsPRJNA4843412|DRA013844|PRJNA615891
ProtocolNETCAGE|CAGE|SLIC_CAGE|TIF-seq2
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2926069,EH38E1858470)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000225873.9:0
ENST00000586663.2:0
U91521:0
BC031085:0
AK312635:0
BC015751:0
GeneID:5193
HGNC/MGI_ID:HGNC:8854
UniProt_ID:A0A075B773 A0PJ54 O00623
Nearer transcript ids and distances:
    Gene_name:PEX12
    Gene_symbol:PEX12
    Gene_synonyms:
    Gene_source:HGNC:8854



    TATA-Box annotation


    Distance to TSS:22
    Nearest PromoterID:NM_000286
    Entrez ID:5193
    Nearest Unigene:Hs.591190
    Nearest Refseq:NM_000286
    Nearest Ensembl:ENSG00000108733
    Gene Name:PEX12
    Gene Alias:PAF-3|PBD3A
    Gene Type:protein-coding
    CpG%:0.097826
    GC%:0.591398
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.