rfmm_100807.1

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Basic information about the TSS


TSS ID:rfmm_100807.1
Species:mouse
Chr:chr10
Start:127031110
End:127031167
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2346661,EM10E0966487)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000219079.2 ENSMUST00000181578.2 AK077682 AK165234
Distance:0
GeneID:100038591
HGNC/MGI_ID:MGI:3642477
UniProt_ID:Q3TNJ6
Gene_name:F420014N23Rik
Gene_symbol:F420014N23Rik
Gene_synonyms:
Gene_source:MGI:3642477



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NR_045716.1
Entrez ID:F420014N23Rik
Nearest Unigene:NR_045715
Nearest Refseq:
Nearest Ensembl:
Gene Name:F420014N23Rik
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.017544
GC%:0.620690
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.