rfmm_104032.1

From referenceTSS
Revision as of 21:22, 21 December 2023 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_104032.1
TSS ID(Version3):mm_101892.1
Species:mouse
Chr:chr11
Start:48955029
End:48955033
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2359800,EM10E0971891)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000046745.7 ENSMUST00000128411.2 AK088858
Distance:0
GeneID:100039796
HGNC/MGI_ID:MGI:3710083
UniProt_ID:Q62293
Gene_name:Tgtp2
Gene_symbol:Tgtp2
Gene_synonyms:
Gene_source:MGI:3710083



TATA-Box annotation


Distance to TSS:8
Nearest PromoterID:NM_001145164.1
Entrez ID:Tgtp2
Nearest Unigene:NM_001145164
Nearest Refseq:
Nearest Ensembl:
Gene Name:Tgtp2
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.