rfmm_39555.1

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Basic information about the TSS


TSS ID:rfmm_39555.1
Species:mouse
Chr:chr4
Start:132611839
End:132611863
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2754223,EM10E1134274)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:AK142202
Distance:0
GeneID:100038703
HGNC/MGI_ID:MGI:3649305
UniProt_ID:Q3UQR6
Gene_name:Stx12
Gene_symbol:Gm13033
Gene_synonyms:
Gene_source:MGI:3649305



TATA-Box annotation


Distance to TSS:-82
Nearest PromoterID:NM_133887.4
Entrez ID:Stx12
Nearest Unigene:NM_133887
Nearest Refseq:
Nearest Ensembl:
Gene Name:Stx12
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.125000
GC%:0.720000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.