rfmm_79384.1

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Basic information about the TSS


TSS ID:rfmm_79384.1
TSS ID(Version3):mm_75935.1
Species:mouse
Chr:chr8
Start:71990020
End:71990116
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2914573,EM10E1203082)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000051672.9:0
BC087949:0
BC056638:0
BC027328:0
AK154399:0
GeneID:69550
HGNC/MGI_ID:MGI:1916800
UniProt_ID:Q8R2Q8
Nearer transcript ids and distances:
    Gene_name:Bst2
    Gene_symbol:Bst2
    Gene_synonyms:2310015I10Rik Bst-2 C87040 GREG
    Gene_source:MGI:1916800



    TATA-Box annotation


    Distance to TSS:48
    Nearest PromoterID:NM_198095.3
    Entrez ID:Bst2
    Nearest Unigene:NM_198095
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Bst2
    Gene Alias:
    Gene Type:
    CpG%:0.041667
    GC%:0.587629
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.