rfmm_93801.1

Basic information about the TSS

TSS ID:	rfmm_93801.1
Species:	mouse
Chr:	chr10

Start:	18110779
End:	18110802
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2314309,EM10E0953103)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:	ENSMUST00000181897.2 AK133237
Distance:	0
GeneID:	100038405
HGNC/MGI_ID:	MGI:3642321
UniProt_ID:	Q3V0D3

Gene_name:	Ccdc28a
Gene_symbol:	Gm10827
Gene_synonyms:
Gene_source:	MGI:3642321

TATA-Box annotation

Distance to TSS:	-57
Nearest PromoterID:	XM_030245002.2
Entrez ID:	Ccdc28a
Nearest Unigene:	XR_003948656
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Ccdc28a
Gene Alias:
Gene Description:
Gene Type:
CpG%:	0.043478
GC%:	0.708333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.