rfhg_101809.1

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Basic information about the TSS


TSS ID:rfhg_101809.1
TSS ID(Version3):hg_81887.1
hg_81886.1
Species:human
Chr:chr7
Start:149195466
End:149195512
Strand:+
Source datasetsFANTOM5|DRA000914|PRJNA4843412|DRA013844|PRJNA401781
|PRJNA615891|PRJNA548673
ProtocolCAGE|NETCAGE|RAMPAGE|SLIC_CAGE|ReCappable-seq
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4045172,EH38E2599921)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF384106:0
MA619683:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • D30612:-4
  • ENST00000610704.5:34
  • NM_003575.4:34
  • NM_001303481.3:34
  • ENST00000479907.1:38
  • AK299280:38
  • BC073805:57
  • AK316282:63
  • AB587508:78
  • BC055287:160
  • BC041704:223
view more...
Gene_name:ZNF282
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-57
Nearest PromoterID:NM_001303481
Entrez ID:8427
Nearest Unigene:Hs.729056
Nearest Refseq:NM_003575
Nearest Ensembl:ENSG00000170265
Gene Name:ZNF282
Gene Alias:HUB1
Gene Type:protein-coding
CpG%:0.065217
GC%:0.617021
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):