rfhg_139430.1

From referenceTSS
Revision as of 20:08, 7 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_139430.1
Species:human
Chr:chr11
Start:65539877
End:65539901
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2459859,EH38E1545283)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF344438:0
MA580015:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AF135961:-252
  • LF344437:-392
  • MA580014:-392
view more...
Gene_name:SCYL1
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:14806
Nearest PromoterID:NM_001048218
Entrez ID:57410
Nearest Unigene:Hs.238839
Nearest Refseq:NM_020680
Nearest Ensembl:ENSG00000142186
Gene Name:SCYL1
Gene Alias:GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP
Gene Type:protein-coding
CpG%:0.083333
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):