rfhg_153182.1

Basic information about the TSS

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TSS ID: rfhg_153182.1 TSS ID(Version3): hg_126611.1 Species: human Chr: chr12		Start: 68686955 End: 68687048 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA597322|PRJNA401781 |PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|STRIPE-seq|RAMPAGE|oligo_capping |ReCappable-seq|SLIC_CAGE|TIF-seq2|NETCAGE|C1CAGE
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2573642,EH38E1622402)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000540453.5:0 ENST00000229179.9:0 ENST00000535333.5:0 ENST00000537598.5:0 ENST00000535718.5:0 NM_020401.4:0 NM_001330192.2:0 AK055629:0 AK315157:0 AK094183:0 BC017167:0 BC043343:0 GeneID: 57122 HGNC/MGI_ID: HGNC:29914 UniProt_ID: G3V1T4 P57740 Nearer transcript ids and distances: ENST00000378905.6:-4 AJ295745:-4 ENST00000539906.5:407 AK302773:407 ENST00000538549.1:414 view more...

Gene_name: NUP107 Gene_symbol: NUP107 Gene_synonyms: NUP84 Gene_source: HGNC:29914

TATA-Box annotation

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Distance to TSS:	23
Nearest PromoterID:	NM_020401
Entrez ID:	57122
Nearest Unigene:	Hs.524574
Nearest Refseq:	NM_020401
Nearest Ensembl:	ENSG00000111581
Gene Name:	NUP107
Gene Alias:	NPHS11|NUP84|ODG6|ODG6; GAMOS7
Gene Type:	protein-coding
CpG%:	0.064516
GC%:	0.563830
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.