rfhg_16718.1

From referenceTSS
Revision as of 14:33, 8 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_16718.1
Species:human
Chr:chr1
Start:183023308
End:183023318
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2249033,EH38E1403519)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF205394:96
MA440971:96
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000258341.5:102
  • NM_002293.4:102
  • BC067813:142
  • LF320111:143
  • MA555688:143
  • J03202:144
  • AB385108:399
view more...
Gene_name:LAMC1
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-107
Nearest PromoterID:NM_002293
Entrez ID:3915
Nearest Unigene:Hs.609663
Nearest Refseq:NM_002293
Nearest Ensembl:ENSG00000135862
Gene Name:LAMC1
Gene Alias:LAMB2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.909091
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):