rfhg_180617.1

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Basic information about the TSS


TSS ID:rfhg_180617.1
Species:human
Chr:chr16
Start:7304527
End:7304550
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2841471,EH38E1799559)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000661083.1:-88
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RBFOX1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-28307
    Nearest PromoterID:NM_145892
    Entrez ID:54715
    Nearest Unigene:Hs.459842
    Nearest Refseq:NM_018723
    Nearest Ensembl:ENSG00000078328
    Gene Name:RBFOX1
    Gene Alias:2BP1|A2BP1|FOX-1|FOX1|HRNBP1
    Gene Type:protein-coding
    CpG%:0.130435
    GC%:0.750000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):