rfhg_194021.1

Basic information about the TSS

TSS ID:	rfhg_194021.1
TSS ID(Version3):	hg_166192.1
Species:	human
Chr:	chr17

Start:	42824249
End:	42824302
Strand:	-

Source datasets

Protocol

TSS cluster detected^*

14

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2933065,EH38E1863903)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000361523.8:0 ENST00000617806.4:0 ENST00000590099.6:0 ENST00000438274.7:0 ENST00000543382.6:0 ENST00000593205.5:0 ENST00000591085.1:0 ENST00000585515.5:0 ENST00000591307.5:0 ENST00000593112.1:0 NM_003766.5:0 NM_001313998.2:0 NM_001314000.2:0 HM005628:0 BC010276:0 BX647788:0 AF139131:0 AK298619:0 AK299616:0 AK223411:0 AK312651:0
GeneID:	8678
HGNC/MGI_ID:	HGNC:1034
UniProt_ID:	A0A024R1X5 B4DQ36 B4DS82 E7EV84 K7EKK2 K7EN35 Q53F78
Nearer transcript ids and distances:	NR_106839.1:306 LY480905:306 LY495834:306 LY496364:306 LY497113:306 LY497733:306 LY498358:306 LY499251:306 LY499927:306 LY500617:306 LZ238781:306 MS868999:306 MS869536:306 MS880566:306 MS884300:306 MS885046:306 MS994372:306 MS996799:306 MA806055:306 LY616545:306 MB407107:306 MB473017:306 LY480782:311 LY495684:311 LY496149:311 LY496920:311 LY497559:311 LY498134:311 LY498973:311 LY499728:311 LY500431:311 LZ238522:311 MS868849:311 MS869350:311 MS880288:311 MS884107:311 MS884847:311 MS994157:311 MS996625:311 MA805778:311 LY616286:311 MB406708:311 MB472786:311 NM_001313999.1:370 AF077301:372 KC776730:372 DQ891633:373 DQ894823:373 view more...

Gene_name:	BECN1
Gene_symbol:	BECN1
Gene_synonyms:	ATG6 VPS30
Gene_source:	HGNC:1034

TATA-Box annotation

Distance to TSS:	7
Nearest PromoterID:	NM_001313998
Entrez ID:	8678
Nearest Unigene:	Hs.716464
Nearest Refseq:	NM_003766
Nearest Ensembl:	ENSG00000126581
Gene Name:	BECN1
Gene Alias:	ATG6\|VPS30\|beclin1
Gene Type:	protein-coding
CpG%:	0.132075
GC%:	0.648148
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "NR_106839.1:306 LY480905:306 LY495834:306 LY496364:306 LY497113:306 LY497733:306 LY498358:306 LY499251:306 LY499927:306 LY500617:306 LZ238781:306 MS868999:306 MS869536:306 MS880566:306 MS884300:306 MS885046:306 MS994372:306 MS996799:306 MA806055:306 LY616545:306 MB407107:306 MB473017:306 LY480782:311 LY495684:311 LY496149:311 LY496920:311 LY497559:311 LY498134:311 LY498973:311 LY499728:311 LY500431:311 LZ238522:311 MS868849:311 MS869350:311 MS880288:311 MS884107:311 MS884847:311 MS994157:311 MS996625:311 MA805778:311 LY616286:311 MB406708:311 MB472786:311 NM_001313999.1:370 AF077301:372 KC776730:372 DQ891633:373 DQ894823:373" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.