rfhg_197281.1

From referenceTSS
Revision as of 18:26, 11 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_197281.1
Species:human
Chr:chr17
Start:63989410
End:63989430
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2951960,EH38E1877874)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000577329.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:PRR29
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-8931
    Nearest PromoterID:NM_001191030
    Entrez ID:92340
    Nearest Unigene:Hs.708161
    Nearest Refseq:NM_001164257
    Nearest Ensembl:ENSG00000224383
    Gene Name:PRR29
    Gene Alias:C17orf72
    Gene Type:protein-coding
    CpG%:0.050000
    GC%:0.761905
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):