rfhg_201136.1

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Basic information about the TSS


TSS ID:rfhg_201136.1
Species:human
Chr:chr18
Start:5521374
End:5521392
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2977382,EH38E1896927)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001384684.1:0
NM_001384690.1:0
NM_001384688.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000580989.5:-31
Gene_name:EPB41L3
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:19173
Nearest PromoterID:NM_001281533
Entrez ID:23136
Nearest Unigene:Hs.213394
Nearest Refseq:NM_012307
Nearest Ensembl:ENSG00000082397
Gene Name:EPB41L3
Gene Alias:4.1B|DAL-1|DAL1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.368421
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):