rfhg_231357.1

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Basic information about the TSS


TSS ID:rfhg_231357.1
Species:human
Chr:chr22
Start:45605429
End:45605435
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D3379064,EH38E2169711)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000422971.1:-186
BC045163:-186
GeneID:100506737
HGNC/MGI_ID:HGNC:51520
UniProt_ID:
Nearer transcript ids and distances:
  • NR_131244.1:-212
Gene_name:LINC01589
Gene_symbol:LINC01589
Gene_synonyms:CTA-941F9.9 TCONS_00029353
Gene_source:HGNC:51520



TATA-Box annotation


Distance to TSS:215
Nearest PromoterID:NR_131244
Entrez ID:100506737
Nearest Unigene:Hs.517692
Nearest Refseq:NR_131244
Nearest Ensembl:ENSG00000238120
Gene Name:LINC01589
Gene Alias:TCONS_00029353
Gene Type:ncRNA
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.