rfhg_30344.1

Basic information about the TSS

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TSS ID: rfhg_30344.1 Species: human Chr: chr2		Start: 105337516 End: 105337586 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJNA615891|PRJNA401781|PRJNA548673 |PRJNA597322|PRJDB5282
Protocol	NETCAGE|CAGE|TIF-seq2|RAMPAGE|oligo_capping|ReCappable-seq |SLIC_CAGE|STRIPE-seq|C1CAGE
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3160030,EH38E2021687)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000410049.1:0 ENST00000258457.7:0 NM_001286537.2:0 NM_024093.3:0 AK307891:0 AK127661:0 BC001310:0 DQ891212:0 DQ894395:0 GeneID: 79074 HGNC/MGI_ID: HGNC:28772 UniProt_ID: C9J4K0 Q9BVC5 Nearer transcript ids and distances: KJ894645:1 AK304268:-157 view more...

Gene_name: C2orf49 Gene_symbol: C2orf49 Gene_synonyms: MGC5509 asw Gene_source: HGNC:28772

TATA-Box annotation

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Distance to TSS:	11
Nearest PromoterID:	NM_001286537
Entrez ID:	79074
Nearest Unigene:	Hs.549577
Nearest Refseq:	NM_024093
Nearest Ensembl:	ENSG00000135974
Gene Name:	C2orf49
Gene Alias:	asw
Gene Type:	protein-coding
CpG%:	0.114286
GC%:	0.633803
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.