rfhg_60809.1

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Basic information about the TSS


TSS ID:rfhg_60809.1
Species:human
Chr:chr4
Start:102500589
End:102500594
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3609004,EH38E2316529)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:NFKB1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-768
    Nearest PromoterID:NM_003998
    Entrez ID:4790
    Nearest Unigene:Hs.618430
    Nearest Refseq:NM_003998
    Nearest Ensembl:ENSG00000109320
    Gene Name:NFKB1
    Gene Alias:CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.333333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):