rfmm_123123.1

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Basic information about the TSS


TSS ID:rfmm_123123.1
Species:mouse
Chr:chr13
Start:38687557
End:38687562
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS,CTCF-bound (EM10D1349030,EM10E0557154)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF236280:64
MA471857:64
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF236279:376
  • MA471856:376
  • LF236281:-429
  • MA471858:-429
view more...
Gene_name:Gm31834
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-19895
Nearest PromoterID:XR_382215.5
Entrez ID:Gm31834
Nearest Unigene:XR_382215
Nearest Refseq:
Nearest Ensembl:
Gene Name:Gm31834
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):