rfmm_159965.1

Basic information about the TSS

TSS ID:	rfmm_159965.1
TSS ID(Version3):	mm_146301.1
Species:	mouse
Chr:	chr18

Start:	80250387
End:	80250481
Strand:	+

Source datasets

FANTOM5|PRJDB10397

Protocol

CAGE|C1CAGE

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2597790,EM10E1071101)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000153363.3:0 AK183568:0 AK185350:0 AK187706:0 AK187751:0 AK189069:0 AK198184:0 AK218707:0 AK181260:0 AK189366:0 AK184254:0
GeneID:	117903916 27366
HGNC/MGI_ID:	MGI:1351613 MGI:3833940
UniProt_ID:	Q9CQX6
Nearer transcript ids and distances:	ENSMUST00000125352.2:-254 ENSMUST00000155879.2:-259 ENSMUST00000127234.8:-277 AK011717:-277 ENSMUST00000126360.2:-278 BC003876:-302 ENSMUST00000025463.14:-305 BC014770:-305 ENSMUST00000025464.8:-309 BC031634:-312 AK171121:-324 ENSMUST00000126177.8:-326 BC025053:-327 AK004039:-330 AK007331:-336 ENSMUST00000145116.8:-342 BC029327:-344 NM_001384178.1:-346 NM_001384176.1:-346 NM_001038608.3:-346 NM_001384175.1:-346 NM_001042408.2:-346 NM_178604.4:-346 NM_001384177.1:-346 NM_025299.4:-346 NM_001384174.1:-346 NM_001384173.1:-346 NR_168914.1:-346 NR_168915.1:-346 NR_168913.1:-346 AK166497:-346 AK148287:-356 ENSMUST00000125127.8:-374 AK010599:-374 ENSMUST00000145963.9:-377 ENSMUST00000156400.9:-407 view more...

Gene_name:	Txnl4a
Gene_symbol:	Naa12 Txnl4a
Gene_synonyms:	D18Wsu98e ENSMUSG00000057130 Gm16286 Txnl4 U5-15kDa
Gene_source:	MGI:1351613 MGI:3833940

TATA-Box annotation

Distance to TSS:	393
Nearest PromoterID:	NR_168913.1
Entrez ID:	Txnl4a
Nearest Unigene:	NM_001042408
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Txnl4a
Gene Alias:
Gene Type:
CpG%:	0.095745
GC%:	0.631579
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000125352.2:-254 ENSMUST00000155879.2:-259 ENSMUST00000127234.8:-277 AK011717:-277 ENSMUST00000126360.2:-278 BC003876:-302 ENSMUST00000025463.14:-305 BC014770:-305 ENSMUST00000025464.8:-309 BC031634:-312 AK171121:-324 ENSMUST00000126177.8:-326 BC025053:-327 AK004039:-330 AK007331:-336 ENSMUST00000145116.8:-342 BC029327:-344 NM_001384178.1:-346 NM_001384176.1:-346 NM_001038608.3:-346 NM_001384175.1:-346 NM_001042408.2:-346 NM_178604.4:-346 NM_001384177.1:-346 NM_025299.4:-346 NM_001384174.1:-346 NM_001384173.1:-346 NR_168914.1:-346 NR_168915.1:-346 NR_168913.1:-346 AK166497:-346 AK148287:-356 ENSMUST00000125127.8:-374 AK010599:-374 ENSMUST00000145963.9:-377 ENSMUST00000156400.9:-407" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.