rfmm_36792.1

Basic information about the TSS

TSS ID:	rfmm_36792.1
Species:	mouse
Chr:	chr4

Start:	101276557
End:	101276575
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2742560,EM10E1128925)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_001177604.1:-39
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000106945.8:-41 AK154374:-41 NM_001177605.1:-48 ENSMUST00000106946.8:-71 NM_001177602.1:-71 AK134600:-71 ENSMUST00000102780.8:-83 LF273420:183 MA508997:183 NM_009647.5:325 ENSMUST00000131397.2:328 LF194500:-354 MA430077:-354 ENSMUST00000133055.8:355 AK144439:355 D85036:361 BC086791:361 AB020239:375 BC086663:381 AK166975:405 view more...

Gene_name:	Ak4
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	48
Nearest PromoterID:	NM_001177604.1
Entrez ID:	Ak4
Nearest Unigene:	NM_001177602
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Ak4
Gene Alias:
Gene Type:
CpG%:	0.055556
GC%:	0.526316
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000106945.8:-41 AK154374:-41 NM_001177605.1:-48 ENSMUST00000106946.8:-71 NM_001177602.1:-71 AK134600:-71 ENSMUST00000102780.8:-83 LF273420:183 MA508997:183 NM_009647.5:325 ENSMUST00000131397.2:328 LF194500:-354 MA430077:-354 ENSMUST00000133055.8:355 AK144439:355 D85036:361 BC086791:361 AB020239:375 BC086663:381 AK166975:405" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.