rfmm_60458.1

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Basic information about the TSS


TSS ID:rfmm_60458.1
Species:mouse
Chr:chr6
Start:121108031
End:121108039
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS,CTCF-bound (EM10D2845910,EM10E1173778)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001270475.1:49
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000204248.2:72
  • AK048201:72
view more...
Gene_name:Mical3
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-53
Nearest PromoterID:NM_001270475.1
Entrez ID:Mical3
Nearest Unigene:XM_030255252
Nearest Refseq:
Nearest Ensembl:
Gene Name:Mical3
Gene Alias:
Gene Type:
CpG%:0.125000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):