rfmm_60730.1

Basic information about the TSS

TSS ID:	rfmm_60730.1
TSS ID(Version3):	mm_52901.1
Species:	mouse
Chr:	chr6

Start:	122684552
End:	122684621
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|PRJDB10397

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AF507043:0 AB093574:0 AK010332:0 AK167259:0
GeneID:	71950
HGNC/MGI_ID:	MGI:1919200
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000012540.5:-25 BC132017:-25 BC137873:-25 BC144995:-25 BC144996:-25 ENSMUST00000112580.8:-28 NM_001289830.1:-28 NM_001289828.1:-28 NM_028016.3:-28 AY455285:-28 AY278951:54 ENSMUST00000112581.8:-104 NM_001289831.1:-104 AY455282:-104 AB126939:121 view more...

Gene_name:	Nanog
Gene_symbol:	Nanog
Gene_synonyms:	2410002E02Rik ENK ecat4
Gene_source:	MGI:1919200

TATA-Box annotation

Distance to TSS:	62
Nearest PromoterID:	NM_001289828.1
Entrez ID:	Nanog
Nearest Unigene:	NM_001289828
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Nanog
Gene Alias:
Gene Type:
CpG%:	0.014493
GC%:	0.514286
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.