rfmm_9531.1

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Basic information about the TSS


TSS ID:rfmm_9531.1
Species:mouse
Chr:chr1
Start:172341689
End:172341714
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D1116473,EM10E0460357)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF219789:35
MA455366:35
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF219790:122
  • MA455367:122
view more...
Gene_name:Cfap45
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-6996
Nearest PromoterID:NM_027972.1
Entrez ID:Cfap45
Nearest Unigene:NM_027972
Nearest Refseq:
Nearest Ensembl:
Gene Name:Cfap45
Gene Alias:
Gene Type:
CpG%:0.080000
GC%:0.730769
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):