rfhg_101003.1

From referenceTSS
Revision as of 11:25, 13 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101003.1
Species:human
Chr:chr7
Start:140641452
End:140641465
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4039651,EH38E2596532)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001318053.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000491728.5:-20
  • BC115004:-21
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001318053
Entrez ID:27147
Nearest Unigene:Hs.6385
Nearest Refseq:NM_015689
Nearest Ensembl:ENSG00000146966
Gene Name:
Gene Alias:FAM31D|KIAA1277
Gene Type:protein-coding
CpG%:0.076923
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):