rfhg_105250.1

Basic information about the TSS

TSS ID:	rfhg_105250.1
Species:	human
Chr:	chr8

Start:	28890166
End:	28890188
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4076575,EH38E2620703)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF385004:0 MA620581:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000416984.6:-54 ENST00000520831.1:188 ENST00000521022.6:197 NM_001172562.2:197 NM_001363038.2:197 NM_018250.4:197 NM_001145159.3:197 NR_026826.3:197 AK225530:202 AK001733:204 AK295977:223 ENST00000522363.5:224 AK300593:225 ENST00000520184.1:232 BC025267:235 ENST00000518510.5:239 ENST00000520983.5:245 ENST00000521777.5:251 AK298468:251 AK225072:252 AK304525:252 ENST00000523303.5:253 BC016687:253 ENST00000523436.5:257 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	4
Nearest PromoterID:	NR_026826
Entrez ID:	55756
Nearest Unigene:	Hs.162397
Nearest Refseq:	NM_018250
Nearest Ensembl:	ENSG00000104299
Gene Name:
Gene Alias:	CPSF2L\|INT9\|RC74
Gene Type:	protein-coding
CpG%:	0.045455
GC%:	0.478261
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENST00000416984.6:-54 ENST00000520831.1:188 ENST00000521022.6:197 NM_001172562.2:197 NM_001363038.2:197 NM_018250.4:197 NM_001145159.3:197 NR_026826.3:197 AK225530:202 AK001733:204 AK295977:223 ENST00000522363.5:224 AK300593:225 ENST00000520184.1:232 BC025267:235 ENST00000518510.5:239 ENST00000520983.5:245 ENST00000521777.5:251 AK298468:251 AK225072:252 AK304525:252 ENST00000523303.5:253 BC016687:253 ENST00000523436.5:257" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.