rfhg_1619.1

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Basic information about the TSS


TSS ID:rfhg_1619.1
Species:human
Chr:chr1
Start:11736471
End:11736483
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2127213,EH38E1319056)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF357357:-44
MA592934:-44
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF357356:-170
  • MA592933:-170
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:341
Nearest PromoterID:NM_020350
Entrez ID:57085
Nearest Unigene:Hs.464438
Nearest Refseq:NM_020350
Nearest Ensembl:ENSG00000177674
Gene Name:
Gene Alias:ATRAP
Gene Type:protein-coding
CpG%:0.083333
GC%:0.846154
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):