rfhg_194926.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2937202,EH38E1867063) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 128 |
|---|---|
| Nearest PromoterID: | NM_000212 |
| Entrez ID: | 3690 |
| Nearest Unigene: | Hs.218040 |
| Nearest Refseq: | NM_000212 |
| Nearest Ensembl: | ENSG00000259207 |
| Gene Name: | |
| Gene Alias: | BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT |
| Gene Type: | protein-coding |
| CpG%: | 0.125000 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AB587392:-104 U95204:-104 ENST00000571680.1:-113 AY826979:-113 M20311:-120 M35999:-122 KC120777:-124 KC120778:-124 BC127666:-124 BC127667:-124 J02703:-124 LP896054:-124 ENST00000559488.7:-139 NM_000212.3:-139 LF213994:-192 MA449571:-192 LF209388:-192 MA444965:-192" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.