rfhg_209166.1

From referenceTSS
Revision as of 21:25, 14 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_209166.1
Species:human
Chr:chr19
Start:17394184
End:17394201
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3047093,EH38E1943380)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001395222.1:0
NM_001395221.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000636079.1:26
  • BC019872:-349
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:11438
Nearest PromoterID:NM_004335
Entrez ID:684
Nearest Unigene:Hs.118110
Nearest Refseq:NM_004335
Nearest Ensembl:ENSG00000130303
Gene Name:
Gene Alias:CD317|TETHERIN
Gene Type:protein-coding
CpG%:0.117647
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):