rfhg_216779.1

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Basic information about the TSS


TSS ID:rfhg_216779.1
Species:human
Chr:chr19
Start:57935354
End:57935411
Strand:-
Source datasetsPRJNA401781|PRJNA548673|PRJNA4843412|DRA013844
ProtocolCAGE|RAMPAGE|ReCappable-seq|oligo_capping|NETCAGE
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3077109,EH38E1966095)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000396147.6:0
ENST00000598213.5:0
ENST00000425570.7:0
ENST00000599852.1:0
ENST00000601593.5:0
ENST00000595569.1:0
ENST00000600353.1:0
AY695825:0
AK293723:0
AK056113:0
AK304632:0
GeneID:147686
HGNC/MGI_ID:HGNC:20647
UniProt_ID:B7Z1P3 B7Z993 J3KQR4 M0QX21 M0QX82 M0QXB3 Q8TF45
Nearer transcript ids and distances:
  • ENST00000600989.5:178
  • BC112244:183
  • BC113707:183
view more...
Gene_name:zinc finger protein 418
Gene_symbol:ZNF418
Gene_synonyms:FLJ31551 KIAA1956
Gene_source:HGNC:20647



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NM_001317028
Entrez ID:147686
Nearest Unigene:Hs.660728
Nearest Refseq:NM_133460
Nearest Ensembl:ENSG00000196724
Gene Name:zinc finger protein 418
Gene Alias:-
Gene Type:protein-coding
CpG%:0.070175
GC%:0.517241
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.