rfhg_40610.1

From referenceTSS
Revision as of 12:10, 15 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_40610.1
Species:human
Chr:chr2
Start:233760264
End:233760274
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D3258812,EH38E2084549)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000305208.10:0
AK290834:0
BC128414:0
BC128415:0
M57899:0
GeneID:54658
HGNC/MGI_ID:HGNC:12530
UniProt_ID:Q5DT03
Nearer transcript ids and distances:
  • LF205292:-2
  • MA440869:-2
  • ENST00000360418.4:14
  • DQ364247:14
  • AY435136:14
  • JQ686667:14
  • JQ699637:14
  • JQ699638:14
  • JQ699639:14
  • JQ699640:14
  • JQ699641:14
  • JQ699642:14
  • JQ699643:14
  • JQ699644:14
  • JQ699645:14
  • JQ699646:14
  • JQ699647:14
  • JQ699649:14
  • JQ699650:14
  • LF318914:275
  • MA554491:275
view more...
Gene_name:UDP glucuronosyltransferase family 1 member A1
Gene_symbol:UGT1A1
Gene_synonyms:UGT1A
Gene_source:HGNC:12530



TATA-Box annotation


Distance to TSS:-4
Nearest PromoterID:NM_000463
Entrez ID:54658
Nearest Unigene:Hs.554822
Nearest Refseq:NM_000463
Nearest Ensembl:ENSG00000241635
Gene Name:UDP glucuronosyltransferase family 1 member A1
Gene Alias:BILIQTL1|GNT1|HUG-BR1|UDPGT|UDPGT 1-1|UGT1|UGT1A
Gene Type:protein-coding
CpG%:0.000000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "LF205292:-2 MA440869:-2 ENST00000360418.4:14 DQ364247:14 AY435136:14 JQ686667:14 JQ699637:14 JQ699638:14 JQ699639:14 JQ699640:14 JQ699641:14 JQ699642:14 JQ699643:14 JQ699644:14 JQ699645:14 JQ699646:14 JQ699647:14 JQ699649:14 JQ699650:14 LF318914:275 MA554491:275" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.