rfhg_48404.1

Basic information about the TSS

TSS ID:	rfhg_48404.1
Species:	human
Chr:	chr3

Start:	109178093
End:	109178122
Strand:	+

Source datasets

PRJDB5282

Protocol

C1CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000648541.1:21
GeneID:	677779
HGNC/MGI_ID:	HGNC:32675
UniProt_ID:
Nearer transcript ids and distances:	ENST00000494582.2:29 NR_026767.1:43 AK123226:43 BC022563:53 view more...

Gene_name:	long intergenic non-protein coding RNA 488
Gene_symbol:	LINC00488
Gene_synonyms:	FLJ41232
Gene_source:	HGNC:32675

TATA-Box annotation

Distance to TSS:	-58
Nearest PromoterID:	NR_026767
Entrez ID:	677779
Nearest Unigene:	Hs.618669
Nearest Refseq:	NM_001040054
Nearest Ensembl:	ENSG00000214381
Gene Name:	long intergenic non-protein coding RNA 488
Gene Alias:	C3orf66
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.