rfhg_52340.1

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Basic information about the TSS


TSS ID:rfhg_52340.1
Species:human
Chr:chr3
Start:160565133
End:160565147
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3508587,EH38E2253526)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000468527.1:300
GeneID:
HGNC/MGI_ID:HGNC:28057
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:keratin 8 pseudogene 12
    Gene_symbol:KRT8P12
    Gene_synonyms:
    Gene_source:HGNC:28057



    TATA-Box annotation


    Distance to TSS:431
    Nearest PromoterID:NM_002268
    Entrez ID:3840
    Nearest Unigene:Hs.467866
    Nearest Refseq:NM_002268
    Nearest Ensembl:ENSG00000186432
    Gene Name:keratin 8 pseudogene 12
    Gene Alias:IPOA3|QIP1|SRP3
    Gene Type:protein-coding
    CpG%:0.071429
    GC%:0.533333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.