rfmm_133439.1

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Basic information about the TSS


TSS ID:rfmm_133439.1
Species:mouse
Chr:chr14
Start:102078024
End:102078034
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1435300,EM10E0590045)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001347628.1:25
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000159314.8:50
  • AK129231:50
  • ENSMUST00000162091.8:-81
  • ENSMUST00000159026.8:-81
  • AK053129:-81
  • AK143133:-81
  • ENSMUST00000159948.8:221
  • BC049164:221
  • ENSMUST00000161668.8:-291
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-13
Nearest PromoterID:XM_036158724.1
Entrez ID:Lmo7
Nearest Unigene:XM_036158724
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.363636
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):