rfmm_137174.1

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Basic information about the TSS


TSS ID:rfmm_137174.1
Species:mouse
Chr:chr15
Start:75713934
End:75713982
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2505535,EM10E1031671)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF244887:72
MA480464:72
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF244886:-208
  • MA480463:-208
  • AK027976:-491
  • LF200308:-492
  • MA435885:-492
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-48
Nearest PromoterID:XM_017316551.1
Entrez ID:Zc3h3
Nearest Unigene:XM_017316551
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.041667
GC%:0.551020
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):