rfmm_38892.1

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Basic information about the TSS


TSS ID:rfmm_38892.1
Species:mouse
Chr:chr4
Start:128700084
End:128700162
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2752153,EM10E1133089)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF194633:178
MA430210:178
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • NM_001081098.1:179
  • LF202561:-242
  • MA438138:-242
  • ENSMUST00000106072.9:246
  • ENSMUST00000170934.3:246
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-218
Nearest PromoterID:NM_001081098.1
Entrez ID:Zfp362
Nearest Unigene:XM_030253454
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.166667
GC%:0.886076
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):