rfmm_61123.1

Basic information about the TSS

TSS ID:	rfmm_61123.1
Species:	mouse
Chr:	chr6

Start:	124785900
End:	124785919
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2847060,EM10E1174354)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF195876:-8 MA431453:-8
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000130160.2:-18 NM_001306053.1:-19 NM_013539.2:-19 ENSMUST00000052727.5:-31 ENSMUST00000143040.8:-52 NM_001306052.1:-52 LF289508:128 MA525085:128 AK148177:-155 BC002005:-262 ENSMUST00000047760.10:-276 NM_001306051.1:-276 NM_001306050.1:-276 LF195875:-277 MA431452:-277 ENSMUST00000112473.2:342 BC010305:342 AF403037:350 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	28
Nearest PromoterID:	NM_001306053.1
Entrez ID:	Spsb2
Nearest Unigene:	NM_001306051
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.450000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000130160.2:-18 NM_001306053.1:-19 NM_013539.2:-19 ENSMUST00000052727.5:-31 ENSMUST00000143040.8:-52 NM_001306052.1:-52 LF289508:128 MA525085:128 AK148177:-155 BC002005:-262 ENSMUST00000047760.10:-276 NM_001306051.1:-276 NM_001306050.1:-276 LF195875:-277 MA431452:-277 ENSMUST00000112473.2:342 BC010305:342 AF403037:350" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.