rfhg_157543.1

From referenceTSS
Revision as of 15:08, 23 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000423999.2) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2617047,EH38E1651316) |chr=chr12 |cpg_percent=0.023256 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_157543.1
Species:human
Chr:chr12
Start:122063387
End:122063431
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2617047,EH38E1651316)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000660647.1:0
GeneID:100506691
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:long intergenic non-protein coding RNA 2985
    Gene_symbol:LINC02985
    Gene_synonyms:
    Gene_source:EntrezGene:100506691



    TATA-Box annotation


    Distance to TSS:60
    Nearest PromoterID:ENST00000540968.1
    Entrez ID:ENSG00000256546
    Nearest Unigene:ENST00000540968
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:long intergenic non-protein coding RNA 2985
    Gene Alias:
    Gene Type:processed_transcript
    CpG%:0.023256
    GC%:0.568182
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.