rfhg_171817.1

From referenceTSS
Revision as of 20:12, 23 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000536835.2) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2771417,EH38E1750145) |chr=chr15 |cpg_percent=0.116667 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_171817.1
TSS ID(Version3):hg_145632.1
Species:human
Chr:chr15
Start:29674980
End:29675041
Strand:+
Source datasets
Protocol
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2771417,EH38E1750145)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:AK096061
Distance:0
GeneID:100130111
HGNC/MGI_ID:HGNC:56346
UniProt_ID:
Gene_name:lung cancer immune cell infiltration associated lncRNA
Gene_symbol:LCIIAR
Gene_synonyms:
Gene_source:HGNC:56346



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:ENST00000536835.2
Entrez ID:ENSG00000256802
Nearest Unigene:ENST00000560994
Nearest Refseq:
Nearest Ensembl:
Gene Name:lung cancer immune cell infiltration associated lncRNA
Gene Alias:
Gene Description:
Gene Type:antisense
CpG%:0.116667
GC%:0.803279
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.