rfhg_190644.1

From referenceTSS
Revision as of 02:56, 24 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000323019.8) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2915414,EH38E1850975) |chr=chr17 |cpg_percent=0.089286 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_190644.1
Species:human
Chr:chr17
Start:18260558
End:18260671
Strand:+
Source datasets
Protocol
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2915414,EH38E1850975)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000578174.5:0
ENST00000395704.8:0
ENST00000395703.8:0
ENST00000577216.1:0
ENST00000578621.5:0
ENST00000579341.5:0
ENST00000583745.1:0
ENST00000323019.9:0
AK128310:0
GeneID:125170
HGNC/MGI_ID:HGNC:17920
UniProt_ID:A8MT25 J3KTJ4 J3QR30 K7EKV6 Q96C03
Nearer transcript ids and distances:
    Gene_name:mitochondrial elongation factor 2
    Gene_symbol:MIEF2
    Gene_synonyms:MGC23130 MiD49
    Gene_source:HGNC:17920



    TATA-Box annotation


    Distance to TSS:-1
    Nearest PromoterID:ENST00000577216.1
    Entrez ID:ENSG00000177427
    Nearest Unigene:ENST00000579341
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:mitochondrial elongation factor 2
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.089286
    GC%:0.654867
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.