rfhg_19929.1

From referenceTSS
Revision as of 06:05, 24 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000359162.6) |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EH38D2276961,EH38E1422568) |chr=chr1 |cpg_percent=0.083333 |d...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_19929.1
Species:human
Chr:chr1
Start:217089868
End:217089881
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2276961,EH38E1422568)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001243505.2:45
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-230
    Nearest PromoterID:ENST00000361525.7
    Entrez ID:ENSG00000196482
    Nearest Unigene:ENST00000391890
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.083333
    GC%:0.692308
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):