rfhg_37310.1

From referenceTSS
Revision as of 19:27, 21 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000321356.8) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D3231151,EH38E2065701) |chr=chr2 |cpg_percent=0.071429 |det...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_37310.1
Species:human
Chr:chr2
Start:200864621
End:200864636
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3231151,EH38E2065701)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF212224:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:Q9NRL6
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:27
    Nearest PromoterID:ENST00000432425.5
    Entrez ID:ENSG00000013441
    Nearest Unigene:ENST00000621181
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.071429
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):