rfhg_50809.1

From referenceTSS
Revision as of 00:22, 22 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000333188.9) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D3491516,EH38E2242450) |chr=chr3 |cpg_percent=0.000000 |det...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_50809.1
Species:human
Chr:chr3
Start:139389776
End:139389787
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3491516,EH38E2242450)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000662234.1:0
GeneID:100507291
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:COPB2 divergent transcript
    Gene_symbol:COPB2-DT
    Gene_synonyms:
    Gene_source:EntrezGene:100507291



    TATA-Box annotation


    Distance to TSS:-33
    Nearest PromoterID:ENST00000504670.5
    Entrez ID:ENSG00000248932
    Nearest Unigene:ENST00000514729
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:COPB2 divergent transcript
    Gene Alias:
    Gene Type:antisense
    CpG%:0.000000
    GC%:0.545455
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.