rfhg_53006.1

From referenceTSS
Revision as of 01:09, 22 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000413821.1) |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EH38D3517334,EH38E2258879) |chr=chr3 |cpg_percent=0.043478 |d...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_53006.1
Species:human
Chr:chr3
Start:173397547
End:173397571
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3517334,EH38E2258879)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001365935.2:173
NM_001365931.2:173
NM_001365925.2:173
NM_001365932.2:173
NM_001365926.2:173
NM_014932.5:173
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-221
    Nearest PromoterID:ENST00000413821.1
    Entrez ID:ENSG00000169760
    Nearest Unigene:ENST00000413821
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.043478
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):