rfmm_108733.1

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Basic information about the TSS


TSS ID:rfmm_108733.1
TSS ID(Version3):mm_97880.1
Species:mouse
Chr:chr11
Start:83115218
End:83115317
Strand:+
Source datasets
Protocol
TSS cluster detected*

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1246554,EM10E0512869)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000216233.2 ENSMUST00000214346.2 AK136560 AK079892 AK079857
Distance:0
GeneID:100043636
HGNC/MGI_ID:MGI:2144254 MGI:3651774
UniProt_ID:
Gene_name:expressed sequence AI662270; predicted gene 11427
Gene_symbol:AI662270 Gm11427
Gene_synonyms:
Gene_source:MGI:2144254 MGI:3651774



TATA-Box annotation


Distance to TSS:-12
Nearest PromoterID:ENSMUST00000216233.2
Entrez ID:ENSMUSG00000083161
Nearest Unigene:ENSMUST00000216233
Nearest Refseq:
Nearest Ensembl:
Gene Name:expressed sequence AI662270; predicted gene 11427
Gene Alias:
Gene Description:
Gene Type:transcribed_unprocessed_pseudogene
CpG%:0.020408
GC%:0.464646
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.