rfmm_124860.1

From referenceTSS
Revision as of 22:43, 25 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000187656.7) |ccre_category=PLS |ccre_description=PLS (EM10D2442851,EM10E1008750) |chr=chr13 |cpg_percent=0.055556 |detailed_a...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_124860.1
Species:mouse
Chr:chr13
Start:62531027
End:62531046
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2442851,EM10E1008750)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000187656.7
Distance:37
GeneID:100041979
HGNC/MGI_ID:MGI:3781781
UniProt_ID:A0A087WPN2
Gene_name:predicted gene 3604
Gene_symbol:Gm3604
Gene_synonyms:
Gene_source:MGI:3781781



TATA-Box annotation


Distance to TSS:-14
Nearest PromoterID:ENSMUST00020181708.1
Entrez ID:ENSMUSG00002075395
Nearest Unigene:ENSMUST00020181708
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene 3604
Gene Alias:
Gene Description:
Gene Type:miRNA
CpG%:0.055556
GC%:0.473684
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.