rfmm_161728.1

From referenceTSS
Revision as of 11:52, 26 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000083153.3) |ccre_category=PLS |ccre_description=PLS (EM10D2603264,EM10E1073692) |chr=chr19 |cpg_percent=0.011765 |detailed_a...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_161728.1
TSS ID(Version3):mm_149010.1
Species:mouse
Chr:chr19
Start:8703224
End:8703310
Strand:+
Source datasets
Protocol
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2603264,EM10E1073692)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000083153.3
Distance:0
GeneID:100127111
HGNC/MGI_ID:MGI:1933385
UniProt_ID:
Gene_name:small nucleolar RNA, C/D box 22
Gene_symbol:Snord22
Gene_synonyms:Rnu22 U22
Gene_source:MGI:1933385



TATA-Box annotation


Distance to TSS:37
Nearest PromoterID:ENSMUST00000083153.3
Entrez ID:ENSMUSG00000065087
Nearest Unigene:ENSMUST00000083153
Nearest Refseq:
Nearest Ensembl:
Gene Name:small nucleolar RNA, C/D box 22
Gene Alias:
Gene Description:
Gene Type:snoRNA
CpG%:0.011765
GC%:0.511628
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.