rfmm_42543.1

From referenceTSS
Revision as of 00:33, 27 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000209248.2) |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EM10D1898364,EM10E0780665) |chr=chr4 |cpg_percent=0.000000...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_42543.1
Species:mouse
Chr:chr4
Start:156214969
End:156214974
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D1898364,EM10E0780665)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000209248.2 AK137636
Distance:0
GeneID:100045778
HGNC/MGI_ID:MGI:3588193
UniProt_ID:A0A1B0GR81
Gene_name:ring finger 223
Gene_symbol:Rnf223
Gene_synonyms:
Gene_source:MGI:3588193



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:ENSMUST00000209248.2
Entrez ID:ENSMUSG00000110404
Nearest Unigene:ENSMUST00000209248
Nearest Refseq:
Nearest Ensembl:
Gene Name:ring finger 223
Gene Alias:
Gene Description:
Gene Type:protein_coding
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.